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CanVAS Shannon · Founder
Cosmic medallion portrait of PFZ31G10_PFZ31G10, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ31G10_PFZ31G10

PFZ31G10_PFZ31G10 is a Golden Retriever from the Shannon research cohort. One of 14,478 dogs who built the atlas.

See PFZ31G10_PFZ31G10 in the atlas
About PFZ31G10_PFZ31G10

PFZ31G10_PFZ31G10 sits well inside the Golden Retriever cluster - a fairly typical example.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
PFZ31G10_PFZ31G10's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ31G10_PFZ31G10's. Click any of them to keep exploring.

  1. PFZ31G09_PFZ31G09 Golden Retriever 27.43
  2. PFZ31C11_PFZ31C11 Golden Retriever 28.97
  3. PFZ31D11_PFZ31D11 Golden Retriever 29.96
  4. PFZ7F05_PFZ7F05 Golden Retriever 31.02
  5. GRLS_grlsNJN1N711 Golden Retriever 32.49
PFZ31G10_PFZ31G10's breed

PFZ31G10_PFZ31G10 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 78%
  2. Labrador Retriever 22%
Source

From the CanVAS (Shannon cohort) . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 C/C
KRT71 C/C
MC1R T/T
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 8.472
y 10.726
z 9.057
PCA-256 distance from breed centroid
34.35
Outlier percentile in breed
49
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ31G10_PFZ31G10 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC63 z = 3.44
  • chr22:1,969,643 loading 0.0329
  • chr22:1,892,165 loading 0.0327
  • chr17:12,181,234 loading 0.0322
PC53 z = -2.46
  • chr1:72,254,803 loading 0.0346
  • chr1:70,825,780 loading 0.0344
  • chr14:9,177,180 loading 0.0335
PC220 z = 2.36
  • chr23:1,615,600 loading 0.0324
  • chr16:44,022,534 loading 0.0322
  • chr20:3,540,281 loading -0.0307
Ancestry reconstruction error: 0.57
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