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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ36C07_PFZ36C07, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ36C07_PFZ36C07

PFZ36C07_PFZ36C07 is a Golden Retriever from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ36C07_PFZ36C07 in the atlas
About PFZ36C07_PFZ36C07

PFZ36C07_PFZ36C07 sits at the edge of the Golden Retriever cluster but still well within it.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
PFZ36C07_PFZ36C07's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ36C07_PFZ36C07's. Click any of them to keep exploring.

  1. GRLS_grls35ULOSZZ Golden Retriever 34.35
  2. GRLS_grls5WX99411 Golden Retriever 34.92
  3. PFZ29A04_PFZ29A04 Golden Retriever 35.29
  4. GRLS_grlsNYYNNTZZ Golden Retriever 35.34
  5. GRLS_grlsZNHICC44 Golden Retriever 35.42
PFZ36C07_PFZ36C07's breed

PFZ36C07_PFZ36C07 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 85%
  2. Labrador Retriever 16%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 T/C
KRT71 C/C
MC1R T/T
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 9.373
y 9.248
z 8.644
PCA-256 distance from breed centroid
35.80
Outlier percentile in breed
57
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ36C07_PFZ36C07 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC66 z = 3.32
  • chr22:1,996,400 loading 0.0426
  • chr22:1,969,643 loading -0.0423
  • chr22:2,473,315 loading 0.0395
PC158 z = -3.02
  • chr1:69,893,718 loading 0.0314
  • chr1:64,453,595 loading -0.0313
  • chr8:29,102,271 loading -0.0309
PC252 z = -2.94
  • chr19:30,132,204 loading 0.0320
  • chr25:21,796,415 loading -0.0316
  • chr3:5,565,848 loading 0.0303
Ancestry reconstruction error: 0.56
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