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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ37D10_PFZ37D10, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ37D10_PFZ37D10

PFZ37D10_PFZ37D10 is a Golden Retriever from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ37D10_PFZ37D10 in the atlas
About PFZ37D10_PFZ37D10

PFZ37D10_PFZ37D10 is a strong genetic outlier within the Golden Retriever cluster - among the most distinctive examples of their breed.

  • Predicted medium by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Smooth coat. No wire-furnishings variant at RSPO2.
PFZ37D10_PFZ37D10's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ37D10_PFZ37D10's. Click any of them to keep exploring.

  1. GRLS_grls94W4KJ77 Golden Retriever 26.16
  2. GRLS_grls50XJN4HH Golden Retriever 27.32
  3. Oldies_grlsb2e5caae Golden Retriever 27.92
  4. PFZ7C09_PFZ7C09 Golden Retriever 29.03
  5. GRLS_grls6X6HLXMM Golden Retriever 29.28
PFZ37D10_PFZ37D10's breed

PFZ37D10_PFZ37D10 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 73%
  2. Labrador Retriever 27%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 C/C
KRT71 C/C
MC1R T/T
Ear set
MSRB3 A/A
Skull shape
BMP3 C/C
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 4.758
y 9.997
z 7.887
PCA-256 distance from breed centroid
47.69
Outlier percentile in breed
96
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ37D10_PFZ37D10 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC43 z = 4.53
  • chr28:11,007,373 loading 0.0365
  • chr28:5,497,677 loading 0.0343
  • chr7:43,226,466 loading 0.0325
PC19 z = -4.24
  • chr36:5,342,283 loading 0.0327
  • chr3:69,391,244 loading 0.0300
  • chr25:17,826,837 loading -0.0278
PC113 z = -3.45
  • chr22:17,237,143 loading 0.0474
  • chr22:17,327,096 loading 0.0458
  • chr1:53,531,199 loading 0.0436
Ancestry reconstruction error: 0.73
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