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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ43B04_PFZ43B04, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ43B04_PFZ43B04

PFZ43B04_PFZ43B04 is a Golden Retriever from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ43B04_PFZ43B04 in the atlas
About PFZ43B04_PFZ43B04

PFZ43B04_PFZ43B04 sits near the center of the Golden Retriever cluster - genetically very typical for the breed.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
PFZ43B04_PFZ43B04's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ43B04_PFZ43B04's. Click any of them to keep exploring.

  1. PFZ32G07_PFZ32G07 Golden Retriever 30.96
  2. PFZ36F11_PFZ36F11 Golden Retriever 31.50
  3. PFZ38D11_PFZ38D11 Golden Retriever 31.51
  4. GRLS_grlsG1NZXTPP Golden Retriever 31.59
  5. GRLS_grls4E3UX6YY Golden Retriever 31.61
PFZ43B04_PFZ43B04's breed

PFZ43B04_PFZ43B04 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 82%
  2. Labrador Retriever 18%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 C/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 7.823
y 10.893
z 7.983
PCA-256 distance from breed centroid
27.48
Outlier percentile in breed
11
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ43B04_PFZ43B04 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC150 z = -3.19
  • chr18:2,954,407 loading 0.0354
  • chr4:9,808,812 loading -0.0348
  • chr24:4,114,956 loading 0.0343
PC151 z = -2.91
  • chr8:31,106,810 loading 0.0325
  • chr8:5,470,795 loading -0.0318
  • chr19:36,545,009 loading -0.0310
PC229 z = 2.75
  • chr1:6,763,543 loading 0.0357
  • chr22:9,968,688 loading -0.0319
  • chr5:58,349,244 loading -0.0314
Ancestry reconstruction error: 0.52
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