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CanVAS Shannon · Founder
Cosmic medallion portrait of PFZ44G05_PFZ44G05, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ44G05_PFZ44G05

PFZ44G05_PFZ44G05 is a Golden Retriever from the Shannon research cohort. One of 14,478 dogs who built the atlas.

See PFZ44G05_PFZ44G05 in the atlas
About PFZ44G05_PFZ44G05

PFZ44G05_PFZ44G05 is a notable Golden Retriever - distinctive within the breed.

  • Predicted medium by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Smooth coat. No wire-furnishings variant at RSPO2.
PFZ44G05_PFZ44G05's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ44G05_PFZ44G05's. Click any of them to keep exploring.

  1. PFZ43A06_PFZ43A06 Golden Retriever 20.32
  2. PFZ29G04_PFZ29G04 Golden Retriever 25.61
  3. PFZ23A03_PFZ23A03 Golden Retriever 34.05
  4. 10931_10931 Golden Retriever 34.11
  5. Oldies_grls95c36f29 Golden Retriever 35.88
PFZ44G05_PFZ44G05's breed

PFZ44G05_PFZ44G05 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 80%
  2. Labrador Retriever 20%
Source

From the CanVAS (Shannon cohort) . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/C
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 T/C
KRT71 C/C
MC1R T/T
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 9.346
y 9.046
z 8.646
PCA-256 distance from breed centroid
40.22
Outlier percentile in breed
77
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ44G05_PFZ44G05 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC159 z = 2.98
  • chr1:17,158,018 loading 0.0357
  • chr5:59,845,529 loading 0.0334
  • chr11:16,824,143 loading -0.0291
PC179 z = 2.92
  • chr34:3,531,310 loading 0.0341
  • chr34:3,128,578 loading -0.0327
  • chr4:57,360,298 loading -0.0326
PC162 z = 2.78
  • chr6:16,267,511 loading 0.0413
  • chr6:16,208,125 loading 0.0394
  • chr6:17,304,623 loading -0.0387
Ancestry reconstruction error: 0.61
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