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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ7D06_PFZ7D06, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ7D06_PFZ7D06

PFZ7D06_PFZ7D06 is a Golden Retriever from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ7D06_PFZ7D06 in the atlas
About PFZ7D06_PFZ7D06

PFZ7D06_PFZ7D06 is a notable Golden Retriever - distinctive within the breed.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
PFZ7D06_PFZ7D06's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ7D06_PFZ7D06's. Click any of them to keep exploring.

  1. GRLS_grlsOFX17FUU Golden Retriever 34.24
  2. GRLS_grlsN09TPIMM Golden Retriever 34.45
  3. GRLS_grlsZ6FMPN22 Golden Retriever 37.06
  4. PFZ36A11_PFZ36A11 Golden Retriever 37.13
  5. GRLS_grlsRGKS99MM Golden Retriever 37.64
PFZ7D06_PFZ7D06's breed

PFZ7D06_PFZ7D06 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 78%
  2. Labrador Retriever 22%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 C/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 T/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 9.493
y 10.376
z 9.132
PCA-256 distance from breed centroid
39.85
Outlier percentile in breed
76
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ7D06_PFZ7D06 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC53 z = -3.94
  • chr1:72,254,803 loading 0.0346
  • chr1:70,825,780 loading 0.0344
  • chr14:9,177,180 loading 0.0335
PC49 z = 3.80
  • chr22:1,808,281 loading 0.0358
  • chr1:70,511,608 loading 0.0354
  • chr22:2,157,682 loading 0.0341
PC82 z = 2.76
  • chr1:68,097,128 loading 0.0396
  • chr1:69,785,342 loading -0.0385
  • chr1:70,040,058 loading 0.0383
Ancestry reconstruction error: 0.61
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