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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ7E03_PFZ7E03, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ7E03_PFZ7E03

PFZ7E03_PFZ7E03 is a Golden Retriever from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ7E03_PFZ7E03 in the atlas
About PFZ7E03_PFZ7E03

PFZ7E03_PFZ7E03 is a notable Golden Retriever - distinctive within the breed.

  • Predicted small by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
PFZ7E03_PFZ7E03's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ7E03_PFZ7E03's. Click any of them to keep exploring.

  1. Oldies_grls18d6f618 Golden Retriever 24.78
  2. GRLS_grlsZ5R0LUCC Golden Retriever 25.28
  3. GRLS_grls4YWCFZZZ Golden Retriever 26.96
  4. GRLS_grlsN38NYTQQ Golden Retriever 27.61
  5. PFZ36B03_PFZ36B03 Golden Retriever 28.10
PFZ7E03_PFZ7E03's breed

PFZ7E03_PFZ7E03 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 75%
  2. Labrador Retriever 25%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 C/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 6.259
y 10.496
z 7.245
PCA-256 distance from breed centroid
41.90
Outlier percentile in breed
83
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ7E03_PFZ7E03 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC152 z = 4.31
  • chr25:28,621,324 loading 0.0364
  • chr20:11,911,649 loading 0.0323
  • chr20:7,517,267 loading -0.0311
PC173 z = 4.05
  • chr17:4,173,842 loading 0.0406
  • chr17:4,233,511 loading 0.0400
  • chr17:4,353,120 loading 0.0343
PC189 z = -3.43
  • chr11:28,721,751 loading 0.0412
  • chr14:3,689,618 loading -0.0355
  • chr11:17,928,935 loading -0.0339
Ancestry reconstruction error: 0.66
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