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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ7E06_PFZ7E06, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ7E06_PFZ7E06

PFZ7E06_PFZ7E06 is a Golden Retriever from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ7E06_PFZ7E06 in the atlas
About PFZ7E06_PFZ7E06

PFZ7E06_PFZ7E06 sits well inside the Golden Retriever cluster - a fairly typical example.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Smooth coat. No wire-furnishings variant at RSPO2.
PFZ7E06_PFZ7E06's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ7E06_PFZ7E06's. Click any of them to keep exploring.

  1. GRLS_grlsDA01X5MM Golden Retriever 30.87
  2. PILOT_grlsUAXKFPVV Golden Retriever 31.86
  3. GRLS_grlsMAGUW399 Golden Retriever 32.70
  4. GRLS_grls41BGRT33 Golden Retriever 33.04
  5. GRLS_grlsNFKUM6GG Golden Retriever 33.29
PFZ7E06_PFZ7E06's breed

PFZ7E06_PFZ7E06 sits firmly in the Golden Retriever cluster.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 100%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 T/T
SMAD2 A/G
LCORL G/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 T/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 8.486
y 10.330
z 8.195
PCA-256 distance from breed centroid
30.90
Outlier percentile in breed
31
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ7E06_PFZ7E06 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC64 z = -2.66
  • chr8:38,372,734 loading 0.0317
  • chr23:20,107,050 loading 0.0304
  • chr23:19,874,668 loading -0.0292
PC213 z = 2.57
  • chr28:12,405,348 loading 0.0374
  • chr22:28,989,668 loading -0.0358
  • chr20:42,542,218 loading -0.0345
PC250 z = -2.55
  • chr9:17,840,166 loading 0.0300
  • chr9:50,441,577 loading 0.0297
  • chr15:28,843,971 loading -0.0296
Ancestry reconstruction error: 0.53
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