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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ7F03_PFZ7F03, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ7F03_PFZ7F03

PFZ7F03_PFZ7F03 is a Golden Retriever from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ7F03_PFZ7F03 in the atlas
About PFZ7F03_PFZ7F03

PFZ7F03_PFZ7F03 sits near the center of the Golden Retriever cluster - genetically very typical for the breed.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
PFZ7F03_PFZ7F03's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ7F03_PFZ7F03's. Click any of them to keep exploring.

  1. PILOT_grls1N26R7HH Golden Retriever 32.20
  2. GRLS_grlsN4PGDWWW Golden Retriever 32.41
  3. GRLS_grlsNGNUZ033 Golden Retriever 32.69
  4. GRLS_grlsJ2N1ZM99 Golden Retriever 32.70
  5. GRLS_grls1FSWKG44 Golden Retriever 32.80
PFZ7F03_PFZ7F03's breed

PFZ7F03_PFZ7F03 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 83%
  2. Labrador Retriever 17%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 C/T
SMAD2 G/G
LCORL G/G
STC2 C/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 C/C
KRT71 C/C
MC1R T/T
Ear set
MSRB3 A/A
Skull shape
BMP3 C/C
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 7.687
y 10.690
z 7.779
PCA-256 distance from breed centroid
28.68
Outlier percentile in breed
18
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ7F03_PFZ7F03 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC235 z = -2.55
  • chr5:7,618,997 loading 0.0371
  • chr18:10,714,022 loading 0.0318
  • chr25:27,400,046 loading 0.0312
PC213 z = 2.46
  • chr28:12,405,348 loading 0.0374
  • chr22:28,989,668 loading -0.0358
  • chr20:42,542,218 loading -0.0345
PC217 z = 2.37
  • chr3:37,847,773 loading 0.0404
  • chr3:37,885,813 loading 0.0400
  • chr3:38,305,313 loading 0.0391
Ancestry reconstruction error: 0.53
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