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Cosmic medallion portrait of PILOT_grlsGGHFUQII, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PILOT_grlsGGHFUQII

PILOT_grlsGGHFUQII is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See PILOT_grlsGGHFUQII in the atlas
About PILOT_grlsGGHFUQII

PILOT_grlsGGHFUQII sits well inside the Golden Retriever cluster - a fairly typical example.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
PILOT_grlsGGHFUQII's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PILOT_grlsGGHFUQII's. Click any of them to keep exploring.

  1. GRLS_grlsQF5ITU77 Golden Retriever 23.59
  2. GRLS_grlsMCWWZIVV Golden Retriever 31.28
  3. GRLS_grls0WE9G899 Golden Retriever 33.21
  4. GRLS_grls5AEVL2JJ Golden Retriever 33.36
  5. GRLS_grlsM48OPWGG Golden Retriever 33.73
PILOT_grlsGGHFUQII's breed

PILOT_grlsGGHFUQII sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 79%
  2. Labrador Retriever 21%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/C
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 9.104
y 10.106
z 9.039
PCA-256 distance from breed centroid
32.97
Outlier percentile in breed
42
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PILOT_grlsGGHFUQII scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC115 z = -3.05
  • chr24:13,855,152 loading 0.0360
  • chr24:10,928,728 loading 0.0358
  • chr10:6,396,863 loading -0.0341
PC110 z = 2.72
  • chr25:1,742,133 loading 0.0401
  • chr28:2,607,542 loading 0.0393
  • chr25:1,819,027 loading 0.0392
PC113 z = 2.64
  • chr22:17,237,143 loading 0.0474
  • chr22:17,327,096 loading 0.0458
  • chr1:53,531,199 loading 0.0436
Ancestry reconstruction error: 0.53
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