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Cosmic medallion portrait of PILOT_grlsPO60V0HH, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PILOT_grlsPO60V0HH

PILOT_grlsPO60V0HH is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See PILOT_grlsPO60V0HH in the atlas
About PILOT_grlsPO60V0HH

PILOT_grlsPO60V0HH is a notable Golden Retriever - distinctive within the breed.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Smooth coat. No wire-furnishings variant at RSPO2.
PILOT_grlsPO60V0HH's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PILOT_grlsPO60V0HH's. Click any of them to keep exploring.

  1. GRLS_grlsW140M811 Golden Retriever 28.52
  2. GRLS_grls20LGRE11 Golden Retriever 31.76
  3. GRLS_grls5WX99411 Golden Retriever 31.95
  4. GRLS_grlsNJ3YMTMM Golden Retriever 33.70
  5. GRLS_grlsMXRC2E11 Golden Retriever 34.42
PILOT_grlsPO60V0HH's breed

PILOT_grlsPO60V0HH sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 75%
  2. Labrador Retriever 25%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 C/C
KRT71 C/C
MC1R T/T
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 9.389
y 9.460
z 9.216
PCA-256 distance from breed centroid
40.43
Outlier percentile in breed
78
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PILOT_grlsPO60V0HH scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC106 z = -3.44
  • chr3:6,720,531 loading 0.0359
  • chr6:29,063,786 loading -0.0348
  • chr3:6,180,668 loading 0.0337
PC217 z = -3.41
  • chr3:37,847,773 loading 0.0404
  • chr3:37,885,813 loading 0.0400
  • chr3:38,305,313 loading 0.0391
PC205 z = -3.38
  • chr28:15,673,727 loading 0.0386
  • chr7:26,386,959 loading -0.0358
  • chr7:26,293,949 loading -0.0338
Ancestry reconstruction error: 0.61
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