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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of BoT_LU60_BoT_LU60, a Border Terrier
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

BoT_LU60_BoT_LU60

BoT_LU60_BoT_LU60 is a Border Terrier from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See BoT_LU60_BoT_LU60 in the atlas
About BoT_LU60_BoT_LU60

BoT_LU60_BoT_LU60 sits well inside the Border Terrier cluster - a fairly typical example.

  • Predicted small by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
BoT_LU60_BoT_LU60's nearest neighbors

The five dogs in the atlas whose genomes sit closest to BoT_LU60_BoT_LU60's. Click any of them to keep exploring.

  1. BoT_33834_BoT_33834 Border Terrier 13.77
  2. BoT_LU76_BoT_LU76 Border Terrier 14.21
  3. BoT_LU72_BoT_LU72 Border Terrier 14.28
  4. BoT_33129_BoT_33129 Border Terrier 14.59
  5. BoT_LU71_BoT_LU71 Border Terrier 14.89
BoT_LU60_BoT_LU60's breed

BoT_LU60_BoT_LU60 sits in the Border Terrier cluster, with genome overlap to Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Border Terrier 94%
  2. Golden Retriever 6%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Border Terrier.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/C
SMAD2 A/A
LCORL G/G
STC2 C/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 C/C
KRT71 T/T
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 3.546
y -7.429
z 0.837
PCA-256 distance from breed centroid
18.93
Outlier percentile in breed
44
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which BoT_LU60_BoT_LU60 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC29 z = -14.28
  • chr1:102,240,612 loading 0.0273
  • chr5:54,742,971 loading 0.0258
  • chr22:42,777,787 loading 0.0256
PC39 z = 3.35
  • chr38:19,205,467 loading 0.0283
  • chr22:8,222,365 loading 0.0280
  • chr29:3,059,812 loading 0.0271
PC34 z = 3.22
  • chr12:32,936,523 loading 0.0310
  • chr24:6,196,307 loading 0.0310
  • chr24:10,982,162 loading 0.0302
Ancestry reconstruction error: 0.19
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