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Body Size

IGF1

chr15:41,493,933-41,567,975 ·

small breeds enriched for short-allele haplotype

Atlas-wide
55%
dog-weighted average
Breeds with data
197
of 215
Dogs contributing
13,409
CanVAS Atlas
What the frequency means

IGF1 is the canonical dog body-size locus (Sutter 2007). The representative SNP at chr15:41.5Mb is in the IGF1 gene body. Direction calibrated against SMALL (chihuahua, pomeranian, ...) vs GIANT (great dane, mastiff, ...) breed pools.

High frequency means

allele common in small body-size pool

Low frequency means

allele common in giant body-size pool

Frequency landscape

Where the body size variant sits across every breed with data, by and grouped by . Each tick is one breed; a variant fixed in one group and absent in another shows up as a gap. These come from one marker per trait, so read them as a : accurate for most breeds, with real exceptions.

0%50%100%
toy18 breeds · mean 88%
non_sporting21 breeds · mean 71%
terrier18 breeds · mean 66%
hound19 breeds · mean 63%
other16 breeds · mean 60%
ancient_landrace48 breeds · mean 59%
sporting18 breeds · mean 54%
working21 breeds · mean 49%
herding15 breeds · mean 44%
mixed_unknown3 breeds · mean 38%
n = 13,409 dogs · CanVAS Atlas (Brundage et al. 2026) · Sniff Atlas
Allele frequency across 197 breeds with data, grouped by AKC breed group. Each accent tick is one breed (fainter = fewer dogs sampled); the bone marker is the group mean. Frequencies are population-level.
Top 10 breeds, highest frequency
  1. 100% n=228
  2. 100% n=62
  3. Shih Tzu toy
    100% n=38
  4. Pug toy
    100% n=31
  5. 100% n=28
  6. Pekingese toy
    100% n=26
  7. 99% n=67
  8. 97% n=26
  9. 97% n=26
  10. 97% n=102
Bottom 10 breeds, lowest frequency
  1. Boxer working
    3% n=192
  2. German Shepherd herding
    6% n=381
  3. 10% n=21
  4. 16% n=31
  5. 18% n=20
  6. Village Dog South Africa 1 ancient_landrace
    18% n=22
  7. 20% n=117
  8. Basset Hound hound
    20% n=34
  9. Mastiff working
    21% n=32
  10. Great Pyrenees working
    21% n=20

94 breeds with fewer than 20 genotyped dogs are not ranked here. At that sample size a single dog swings the frequency, so the figure is not yet stable enough to compare.

Methodology

Frequency is measured at the typed-backbone 15:41555463 on chr15, 41.6 Mb (inside the gene body). Alleles C/A. Coordinates from ensembl symbol UU Cfam GSD 1.0. Per-breed frequencies are computed across all CanVAS dogs labelled with that breed (missing genotypes excluded).

In the reference databases

IGF1 as it is catalogued across the genomics world. Each link is the canonical record, so this gene composes with everything those resources know.

The human counterpart

In humans, this gene's counterpart is IGF1. That ortholog is what connects IGF1 to a century of human medical genetics. The dog and human proteins are 88% identical.

In people, IGF1 appears tolerant of loss-of-function variation (gnomAD v4.1 constraint, LOEUF 0.68). Constraint measures intolerance to loss-of-function only and does not indicate importance; some tolerant genes cause disease through other mechanisms.

In people, variants in the IGF1 gene have conflicting classifications in ClinVar, and none is expert-reviewed. The evidence is unsettled, not that variants here are benign.

How to cite this page

The per-breed allele frequencies on this page are derived from the open Sniff Atlas v1.0.1 (Gehring 2026, doi:10.5281/zenodo.20566358, CC-BY 4.0). The underlying genotype substrate is CanVAS (Brundage 2026, doi:10.64898/2026.04.13.718238), and disease associations are grounded in OMIA. Full citation formats including BibTeX, RIS, and CITATION.cff at sniff.world/cite.

Last updated
Sources: Sniff Atlas v1.0.1 (doi:10.5281/zenodo.20566358) · CanVAS (Brundage 2026) · OMIA · Dog10K (Meadows 2023) · gnomAD v4.1 (Karczewski 2020) · ClinVar (Landrum 2018)