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Body Size

SMAD2

chr7:43,688,668-43,762,252 ·

small vs giant strong differentiation chr7

Atlas-wide
74%
dog-weighted average
Breeds with data
208
of 215
Dogs contributing
13,523
CanVAS Atlas
What the frequency means

SMAD2 chr7:43.7Mb. Strong size-discriminating locus identified by Plassais 2019. Direction: SMALL vs GIANT (note: opposite sign convention from IGF1/HMGA2 at this rep SNP).

High frequency means

allele common in giant breeds

Low frequency means

allele common in small breeds

Frequency landscape

Where the body size variant sits across every breed with data, by and grouped by . Each tick is one breed; a variant fixed in one group and absent in another shows up as a gap. These come from one marker per trait, so read them as a : accurate for most breeds, with real exceptions.

0%50%100%
working21 breeds · mean 86%
herding16 breeds · mean 77%
other16 breeds · mean 74%
hound20 breeds · mean 67%
ancient_landrace51 breeds · mean 65%
sporting19 breeds · mean 64%
mixed_unknown3 breeds · mean 63%
non_sporting22 breeds · mean 56%
terrier22 breeds · mean 55%
toy18 breeds · mean 11%
n = 13,523 dogs · CanVAS Atlas (Brundage et al. 2026) · Sniff Atlas
Allele frequency across 208 breeds with data, grouped by AKC breed group. Each accent tick is one breed (fainter = fewer dogs sampled); the bone marker is the group mean. Frequencies are population-level.
Top 10 breeds, highest frequency
  1. Newfoundland working
    100% n=182
  2. 100% n=37
  3. Finnish Spitz non_sporting
    100% n=22
  4. Collie herding
    100% n=20
  5. Great Pyrenees working
    100% n=20
  6. 99% n=532
  7. 98% n=141
  8. German Shepherd herding
    97% n=381
  9. 95% n=20
  10. Eurasier other
    93% n=22
Bottom 10 breeds, lowest frequency
  1. Pug toy
    0% n=31
  2. Shih Tzu toy
    0% n=38
  3. 2% n=228
  4. 3% n=32
  5. Pekingese toy
    4% n=26
  6. Chihuahua toy
    6% n=25
  7. 8% n=25
  8. 14% n=28
  9. 15% n=62
  10. Lhasa Apso non_sporting
    15% n=26

105 breeds with fewer than 20 genotyped dogs are not ranked here. At that sample size a single dog swings the frequency, so the figure is not yet stable enough to compare.

Methodology

Frequency is measured at the typed-backbone 7:43693994 on chr7, 43.7 Mb (inside the gene body). Alleles A/G. Coordinates from ensembl symbol UU Cfam GSD 1.0. Per-breed frequencies are computed across all CanVAS dogs labelled with that breed (missing genotypes excluded).

In the reference databases

SMAD2 as it is catalogued across the genomics world. Each link is the canonical record, so this gene composes with everything those resources know.

The human counterpart

In humans, this gene's counterpart is SMAD2. That ortholog is what connects SMAD2 to a century of human medical genetics. The dog and human proteins are 100% identical (a lower-confidence 1:1 call, shown for transparency, not hidden).

In people, SMAD2 rarely tolerates loss-of-function variation (gnomAD v4.1 constraint, LOEUF 0.25), a sign it does important, dosage-sensitive work.

In people, variants in the SMAD2 gene have conflicting classifications in ClinVar, and none is expert-reviewed. The evidence is unsettled, not that variants here are benign.

How to cite this page

The per-breed allele frequencies on this page are derived from the open Sniff Atlas v1.0.1 (Gehring 2026, doi:10.5281/zenodo.20566358, CC-BY 4.0). The underlying genotype substrate is CanVAS (Brundage 2026, doi:10.64898/2026.04.13.718238), and disease associations are grounded in OMIA. Full citation formats including BibTeX, RIS, and CITATION.cff at sniff.world/cite.

Last updated
Sources: Sniff Atlas v1.0.1 (doi:10.5281/zenodo.20566358) · CanVAS (Brundage 2026) · OMIA · Dog10K (Meadows 2023) · gnomAD v4.1 (Karczewski 2020) · ClinVar (Landrum 2018)