Skip to main content
snıff
CanVAS Hayward2016 · Founder
Cosmic medallion portrait of BSJI_2634_BSJI_2634, a Basenji
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

BSJI_2634_BSJI_2634

BSJI_2634_BSJI_2634 is a Basenji from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See BSJI_2634_BSJI_2634 in the atlas
About BSJI_2634_BSJI_2634

BSJI_2634_BSJI_2634 sits near the center of the Basenji cluster - genetically very typical for the breed.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
BSJI_2634_BSJI_2634's nearest neighbors

The five dogs in the atlas whose genomes sit closest to BSJI_2634_BSJI_2634's. Click any of them to keep exploring.

  1. BSJI_45241_BSJI_45241 Basenji 13.70
  2. BSJI_48559_BSJI_48559 Basenji 14.94
  3. BSJI_9004_BSJI_9004 Basenji 14.97
  4. BSJI_7769_BSJI_7769 Basenji 15.00
  5. BSJI_12301_BSJI_12301 Basenji 15.13
BSJI_2634_BSJI_2634's breed

BSJI_2634_BSJI_2634 sits in the Basenji cluster, with genome overlap to Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Basenji 94%
  2. Golden Retriever 6%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Basenji.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 T/T
SMAD2 A/A
LCORL A/A
STC2 C/C
ADAMTS17 A/A
Leg length
FGF4·CFA18 T/C
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 T/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 G/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 6.736
y 1.367
z -0.301
PCA-256 distance from breed centroid
18.37
Outlier percentile in breed
8
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which BSJI_2634_BSJI_2634 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC26 z = -9.55
  • chr6:1,658,873 loading 0.0279
  • chr6:1,741,489 loading 0.0277
  • chr27:35,211,437 loading -0.0271
PC27 z = -7.50
  • chr12:64,188,765 loading 0.0337
  • chr23:18,821,315 loading -0.0287
  • chr4:53,307,196 loading -0.0287
PC11 z = 3.37
  • chr6:60,987,558 loading 0.0302
  • chr18:25,790,852 loading 0.0293
  • chr14:14,074,192 loading -0.0293
Ancestry reconstruction error: 0.21
Back to the Atlas →