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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of BSJI_35552_BSJI_35552, a Basenji
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

BSJI_35552_BSJI_35552

BSJI_35552_BSJI_35552 is a Basenji from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See BSJI_35552_BSJI_35552 in the atlas
About BSJI_35552_BSJI_35552

BSJI_35552_BSJI_35552 sits well inside the Basenji cluster - a fairly typical example.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries both copies of the FGF4 chondrodysplasia retrogene - the short-leg variant in Dachshund, Pembroke Corgi, Basset Hound.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
BSJI_35552_BSJI_35552's nearest neighbors

The five dogs in the atlas whose genomes sit closest to BSJI_35552_BSJI_35552's. Click any of them to keep exploring.

  1. PFZ14C11_PFZ14C11 Basenji 14.14
  2. PFZ15F01_PFZ15F01 Basenji 14.46
  3. BSJI_35551_BSJI_35551 Basenji 14.59
  4. PFZ14A10_PFZ14A10 Basenji 14.61
  5. 8114_8114 Basenji 14.79
BSJI_35552_BSJI_35552's breed

BSJI_35552_BSJI_35552 sits in the Basenji cluster, with genome overlap to Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Basenji 94%
  2. Golden Retriever 6%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Basenji.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 T/T
SMAD2 A/G
LCORL G/G
STC2 C/C
ADAMTS17 A/A
Leg length
FGF4·CFA18 T/T
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 T/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 G/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 6.776
y 1.353
z -0.316
PCA-256 distance from breed centroid
21.91
Outlier percentile in breed
30
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which BSJI_35552_BSJI_35552 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC26 z = -9.29
  • chr6:1,658,873 loading 0.0279
  • chr6:1,741,489 loading 0.0277
  • chr27:35,211,437 loading -0.0271
PC27 z = -7.09
  • chr12:64,188,765 loading 0.0337
  • chr23:18,821,315 loading -0.0287
  • chr4:53,307,196 loading -0.0287
PC11 z = 3.30
  • chr6:60,987,558 loading 0.0302
  • chr18:25,790,852 loading 0.0293
  • chr14:14,074,192 loading -0.0293
Ancestry reconstruction error: 0.27
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