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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of C3-B4-FEMALE-N/A_C3-B4-FEMALE-N/A, a Boxer
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

C3-B4-FEMALE-N/A_C3-B4-FEMALE-N/A

C3-B4-FEMALE-N/A_C3-B4-FEMALE-N/A is a Boxer from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See C3-B4-FEMALE-N/A_C3-B4-FEMALE-N/A in the atlas
About C3-B4-FEMALE-N/A_C3-B4-FEMALE-N/A

C3-B4-FEMALE-N/A_C3-B4-FEMALE-N/A sits well inside the Boxer cluster - a fairly typical example.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Smooth coat. No wire-furnishings variant at RSPO2.
C3-B4-FEMALE-N/A_C3-B4-FEMALE-N/A's nearest neighbors

The five dogs in the atlas whose genomes sit closest to C3-B4-FEMALE-N/A_C3-B4-FEMALE-N/A's. Click any of them to keep exploring.

  1. PFZ23D09_PFZ23D09 Boxer 17.29
  2. PFZ41F08_PFZ41F08 Boxer 17.47
  3. PFZ42A02_PFZ42A02 Boxer 17.83
  4. C5-HUC14-MALE-N/A_C5-HUC14-MALE-N/A Boxer 17.90
  5. PFZ41E08_PFZ41E08 Boxer 18.07
C3-B4-FEMALE-N/A_C3-B4-FEMALE-N/A's breed

C3-B4-FEMALE-N/A_C3-B4-FEMALE-N/A sits firmly in the Boxer cluster.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Boxer 100%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Boxer.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 T/T
SMAD2 A/G
LCORL A/A
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 T/C
KRT71 T/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x -3.857
y 0.260
z -1.468
PCA-256 distance from breed centroid
14.95
Outlier percentile in breed
31
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which C3-B4-FEMALE-N/A_C3-B4-FEMALE-N/A scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC6 z = -6.31
  • chr21:49,939,565 loading 0.0237
  • chr6:69,385,669 loading 0.0231
  • chr30:13,959,767 loading -0.0230
PC7 z = -2.95
  • chr17:45,883,815 loading 0.0290
  • chr17:6,654,333 loading 0.0283
  • chr34:27,183,296 loading 0.0282
PC5 z = -2.16
  • chr1:24,578,804 loading 0.0240
  • chr2:19,906,795 loading 0.0230
  • chr13:51,091,794 loading 0.0227
Ancestry reconstruction error: 0.15
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