Skip to main content
snıff
CanVAS Chen · Founder
Cosmic medallion portrait of C_CRD_C_CRD6, a Chinese Rural Dog
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

C_CRD_C_CRD6

C_CRD_C_CRD6 is a Chinese Rural Dog from the Chen research cohort. One of 14,478 dogs who built the atlas.

See C_CRD_C_CRD6 in the atlas
About C_CRD_C_CRD6

C_CRD_C_CRD6 sits well inside the Chinese Rural Dog cluster - a fairly typical example.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
C_CRD_C_CRD6's nearest neighbors

The five dogs in the atlas whose genomes sit closest to C_CRD_C_CRD6's. Click any of them to keep exploring.

  1. C_CRD_C_CRD9 Chinese Rural Dog 15.65
  2. C_CRD_C_CRD12 Chinese Rural Dog 15.67
  3. C_CRD_C_CRD7 Chinese Rural Dog 16.30
  4. C_CRD_C_CRD1 Chinese Rural Dog 16.34
  5. VN69_VN69 Village Dog Vietnam Lao Cai 16.40
C_CRD_C_CRD6's breed

C_CRD_C_CRD6 sits firmly in the Golden Retriever cluster.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 100%
Source

From the CanVAS (Chen cohort) . Breed-page reference: Chinese Rural Dog.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 T/T
SMAD2 G/G
LCORL A/G
STC2 C/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 8.883
y 6.289
z -0.644
PCA-256 distance from breed centroid
10.92
Outlier percentile in breed
44
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which C_CRD_C_CRD6 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC11 z = 3.82
  • chr6:60,987,558 loading 0.0302
  • chr18:25,790,852 loading 0.0293
  • chr14:14,074,192 loading -0.0293
PC26 z = 2.48
  • chr6:1,658,873 loading 0.0279
  • chr6:1,741,489 loading 0.0277
  • chr27:35,211,437 loading -0.0271
PC4 z = 1.88
  • chr22:30,024,556 loading 0.0245
  • chr37:4,915,461 loading -0.0233
  • chr3:48,760,513 loading 0.0227
Ancestry reconstruction error: 0.43
Back to the Atlas →