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CanVAS Chen · Founder
Cosmic medallion portrait of C_TMf_C_TMf10, a Tibetan Mastiff
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

C_TMf_C_TMf10

C_TMf_C_TMf10 is a Tibetan Mastiff from the Chen research cohort. One of 14,478 dogs who built the atlas.

See C_TMf_C_TMf10 in the atlas
About C_TMf_C_TMf10

C_TMf_C_TMf10 sits well inside the Tibetan Mastiff cluster - a fairly typical example.

  • Predicted medium by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
C_TMf_C_TMf10's nearest neighbors

The five dogs in the atlas whose genomes sit closest to C_TMf_C_TMf10's. Click any of them to keep exploring.

  1. C_TMf_C_TMf12 Tibetan Mastiff 16.90
  2. C_HTM_C_HTM4 Hequ Tibetan Mastiff 17.46
  3. C_TMf_C_TMf14 Tibetan Mastiff 18.39
  4. TIBM_China_TIBM_25311 Tibetan Mastiff 18.39
  5. TIBM_China_TIBM_25312 Tibetan Mastiff 18.80
C_TMf_C_TMf10's breed

C_TMf_C_TMf10 sits in the Tibetan Mastiff cluster, with genome overlap to Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Tibetan Mastiff 90%
  2. Golden Retriever 11%
Source

From the CanVAS (Chen cohort) . Breed-page reference: Tibetan Mastiff.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/C
SMAD2 A/G
LCORL G/G
STC2 C/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 G/G
Skull shape
BMP3 T/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 4.236
y 4.667
z 0.846
PCA-256 distance from breed centroid
27.22
Outlier percentile in breed
34
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which C_TMf_C_TMf10 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC11 z = 3.08
  • chr6:60,987,558 loading 0.0302
  • chr18:25,790,852 loading 0.0293
  • chr14:14,074,192 loading -0.0293
PC207 z = -2.05
  • chr13:666,991 loading 0.0347
  • chr25:4,215,319 loading -0.0336
  • chr18:33,604,976 loading 0.0307
PC201 z = 1.92
  • chr28:5,497,677 loading 0.0416
  • chr28:5,428,661 loading 0.0337
  • chr20:7,134,018 loading 0.0323
Ancestry reconstruction error: 0.47
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