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CanVAS JenkinsWGS · Founder
Cosmic medallion portrait of FCR_34446_FCR_34446, a Flat Coated Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

FCR_34446_FCR_34446

FCR_34446_FCR_34446 is a Flat Coated Retriever from the JenkinsWGS research cohort. One of 14,478 dogs who built the atlas.

See FCR_34446_FCR_34446 in the atlas
About FCR_34446_FCR_34446

FCR_34446_FCR_34446 sits well inside the Flat Coated Retriever cluster - a fairly typical example.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Carrier of the RSPO2 wire-coat variant (single copy).
FCR_34446_FCR_34446's nearest neighbors

The five dogs in the atlas whose genomes sit closest to FCR_34446_FCR_34446's. Click any of them to keep exploring.

  1. FCR_25382_FCR_25382 Flat Coated Retriever 18.22
  2. PFZ42E05_PFZ42E05 Flat Coated Retriever 18.69
  3. PFZ14C08_PFZ14C08 Flat Coated Retriever 19.76
  4. FCR_7897_FCR_7897 Flat Coated Retriever 20.01
  5. FCR_25384_FCR_25384 Flat Coated Retriever 22.85
FCR_34446_FCR_34446's breed

FCR_34446_FCR_34446 sits in the Flat Coated Retriever cluster, with genome overlap to Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Flat Coated Retriever 94%
  2. Golden Retriever 6%
Source

From the CanVAS (JenkinsWGS cohort) . Breed-page reference: Flat Coated Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 T/T
SMAD2 A/G
LCORL G/G
STC2 C/C
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 T/C
Coat
RSPO2 C/T
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 16.071
y 4.019
z 6.845
PCA-256 distance from breed centroid
20.30
Outlier percentile in breed
33
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which FCR_34446_FCR_34446 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC41 z = -13.50
  • chr1:34,965,612 loading 0.0332
  • chr1:34,919,792 loading 0.0296
  • chr13:27,716,342 loading 0.0283
PC44 z = 4.76
  • chr29:21,886,817 loading 0.0283
  • chr32:36,857,898 loading -0.0278
  • chr37:28,513,334 loading -0.0274
PC39 z = -3.75
  • chr38:19,205,467 loading 0.0283
  • chr22:8,222,365 loading 0.0280
  • chr29:3,059,812 loading 0.0271
Ancestry reconstruction error: 0.26
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