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Cosmic medallion portrait of GRLS_grlsAW5UKVOO, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grlsAW5UKVOO

GRLS_grlsAW5UKVOO is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grlsAW5UKVOO in the atlas
About GRLS_grlsAW5UKVOO

GRLS_grlsAW5UKVOO sits well inside the Golden Retriever cluster - a fairly typical example.

  • Predicted small by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
GRLS_grlsAW5UKVOO's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grlsAW5UKVOO's. Click any of them to keep exploring.

  1. GRLS_grlsKS0TR99 Golden Retriever 30.55
  2. GRLS_grlsXUR2PY88 Golden Retriever 31.09
  3. GRLS_grlsMT3GPYY Golden Retriever 33.25
  4. GRLS_grlsXRKVV33 Golden Retriever 33.84
  5. GRLS_grls5Q2QZUSS Golden Retriever 34.24
GRLS_grlsAW5UKVOO's breed

GRLS_grlsAW5UKVOO sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 76%
  2. Labrador Retriever 24%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 C/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/C
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 5.986
y 10.690
z 7.774
PCA-256 distance from breed centroid
33.50
Outlier percentile in breed
45
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grlsAW5UKVOO scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC207 z = -2.49
  • chr13:666,991 loading 0.0347
  • chr25:4,215,319 loading -0.0336
  • chr18:33,604,976 loading 0.0307
PC43 z = 2.43
  • chr28:11,007,373 loading 0.0365
  • chr28:5,497,677 loading 0.0343
  • chr7:43,226,466 loading 0.0325
PC251 z = 2.22
  • chr25:40,121,397 loading 0.0326
  • chr28:17,013,099 loading 0.0310
  • chr26:15,170,564 loading 0.0302
Ancestry reconstruction error: 0.60
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