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Cosmic medallion portrait of GRLS_grlsCXY7OWNN, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grlsCXY7OWNN

GRLS_grlsCXY7OWNN is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grlsCXY7OWNN in the atlas
About GRLS_grlsCXY7OWNN

GRLS_grlsCXY7OWNN sits at the edge of the Golden Retriever cluster but still well within it.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
GRLS_grlsCXY7OWNN's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grlsCXY7OWNN's. Click any of them to keep exploring.

  1. GRLS_grlsME3L0P77 Golden Retriever 27.54
  2. GRLS_grlsUIC8JLGG Golden Retriever 29.25
  3. GRLS_grlsOESN6EII Golden Retriever 31.11
  4. GRe_GT212_GRe_GT212 Golden Retriever 35.51
  5. GOLD_GRe_0GT212 Golden Retriever 35.51
GRLS_grlsCXY7OWNN's breed

GRLS_grlsCXY7OWNN sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 78%
  2. Labrador Retriever 22%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 C/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/C
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 8.746
y 9.574
z 8.370
PCA-256 distance from breed centroid
35.73
Outlier percentile in breed
56
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grlsCXY7OWNN scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC161 z = -3.42
  • chr25:6,699,887 loading 0.0385
  • chr8:38,372,734 loading -0.0369
  • chr15:23,258,994 loading -0.0343
PC113 z = 2.89
  • chr22:17,237,143 loading 0.0474
  • chr22:17,327,096 loading 0.0458
  • chr1:53,531,199 loading 0.0436
PC217 z = 2.72
  • chr3:37,847,773 loading 0.0404
  • chr3:37,885,813 loading 0.0400
  • chr3:38,305,313 loading 0.0391
Ancestry reconstruction error: 0.58
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