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Cosmic medallion portrait of GRLS_grlsK4YY7YRR, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grlsK4YY7YRR

GRLS_grlsK4YY7YRR is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grlsK4YY7YRR in the atlas
About GRLS_grlsK4YY7YRR

GRLS_grlsK4YY7YRR sits well inside the Golden Retriever cluster - a fairly typical example.

  • Predicted small by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
GRLS_grlsK4YY7YRR's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grlsK4YY7YRR's. Click any of them to keep exploring.

  1. PILOT_grlsUAXKFPVV Golden Retriever 31.91
  2. GRLS_grls9KYH1GAA Golden Retriever 32.71
  3. GRLS_grlsB1C8Z3DD Golden Retriever 33.44
  4. PFZ8B07_PFZ8B07 Golden Retriever 33.83
  5. PILOT_grlsB6NLVIUU Golden Retriever 33.91
GRLS_grlsK4YY7YRR's breed

GRLS_grlsK4YY7YRR sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 78%
  2. Labrador Retriever 22%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/C
SMAD2 A/G
LCORL G/G
STC2 C/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 T/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/C
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 8.744
y 9.780
z 8.414
PCA-256 distance from breed centroid
30.97
Outlier percentile in breed
32
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grlsK4YY7YRR scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC181 z = 2.66
  • chr19:2,539,757 loading 0.0344
  • chr3:6,392,552 loading -0.0326
  • chr6:16,157,160 loading 0.0301
PC253 z = 2.25
  • chr27:12,240,889 loading 0.0349
  • chr22:40,186,686 loading -0.0299
  • chr3:9,727,004 loading 0.0298
PC173 z = 2.23
  • chr17:4,173,842 loading 0.0406
  • chr17:4,233,511 loading 0.0400
  • chr17:4,353,120 loading 0.0343
Ancestry reconstruction error: 0.50
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