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GRLS Hero · Founder
Cosmic medallion portrait of GRLS_grlsOIN3DRHH, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grlsOIN3DRHH

GRLS_grlsOIN3DRHH is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grlsOIN3DRHH in the atlas
About GRLS_grlsOIN3DRHH

GRLS_grlsOIN3DRHH sits well inside the Golden Retriever cluster - a fairly typical example.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Smooth coat. No wire-furnishings variant at RSPO2.
GRLS_grlsOIN3DRHH's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grlsOIN3DRHH's. Click any of them to keep exploring.

  1. GRLS_grls0CITW633 Golden Retriever 23.80
  2. GRLS_grlsMGE5UI55 Golden Retriever 34.32
  3. GRLS_grlsGXI98U11 Golden Retriever 34.41
  4. PILOT_grlsB6NLVIUU Golden Retriever 34.70
  5. GRLS_grlsB0XV4P22 Golden Retriever 34.88
GRLS_grlsOIN3DRHH's breed

GRLS_grlsOIN3DRHH sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 79%
  2. Labrador Retriever 21%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 T/T
KRT71 C/C
MC1R T/T
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 7.933
y 10.086
z 8.018
PCA-256 distance from breed centroid
31.09
Outlier percentile in breed
33
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grlsOIN3DRHH scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC218 z = -4.10
  • chr7:62,094,557 loading 0.0330
  • chr17:4,233,511 loading -0.0324
  • chr28:21,567,516 loading 0.0320
PC241 z = 2.48
  • chr29:25,388,461 loading 0.0320
  • chr9:34,293,305 loading 0.0320
  • chr6:50,176,215 loading 0.0305
PC79 z = 2.43
  • chr3:7,389,779 loading 0.0444
  • chr3:6,720,531 loading -0.0378
  • chr3:6,392,552 loading -0.0378
Ancestry reconstruction error: 0.56
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