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Cosmic medallion portrait of GRLS_grlsX2F2CUTT, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grlsX2F2CUTT

GRLS_grlsX2F2CUTT is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grlsX2F2CUTT in the atlas
About GRLS_grlsX2F2CUTT

GRLS_grlsX2F2CUTT sits at the edge of the Golden Retriever cluster but still well within it.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
GRLS_grlsX2F2CUTT's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grlsX2F2CUTT's. Click any of them to keep exploring.

  1. GRLS_grlsZUCGUQHH Golden Retriever 31.46
  2. GRLS_grlsTM2KR9LL Golden Retriever 31.57
  3. GRLS_grlsPRRFU5WW Golden Retriever 31.77
  4. GRLS_grlsSWZTK2YY Golden Retriever 31.78
  5. PILOT_grls4EZBX0GG Golden Retriever 32.28
GRLS_grlsX2F2CUTT's breed

GRLS_grlsX2F2CUTT sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 82%
  2. Labrador Retriever 18%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 T/T
SMAD2 A/G
LCORL G/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 C/C
KRT71 C/C
MC1R T/T
Ear set
MSRB3 A/A
Skull shape
BMP3 C/C
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 8.182
y 9.303
z 7.603
PCA-256 distance from breed centroid
37.06
Outlier percentile in breed
63
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grlsX2F2CUTT scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC66 z = -3.89
  • chr22:1,996,400 loading 0.0426
  • chr22:1,969,643 loading -0.0423
  • chr22:2,473,315 loading 0.0395
PC223 z = -3.18
  • chr7:43,046,169 loading 0.0391
  • chr13:1,840,654 loading 0.0338
  • chr22:3,486,881 loading -0.0327
PC120 z = 2.94
  • chr3:1,222,422 loading 0.0435
  • chr34:3,128,578 loading 0.0397
  • chr34:1,919,265 loading -0.0396
Ancestry reconstruction error: 0.57
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