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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of Li83_Li83, a Village Dog Nigeria
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

Li83_Li83

Li83_Li83 is labelled Village Dog Nigeria in the Hayward2016 cohort - a catch-all CanVAS label, not a literal ancestry call. One of 14,478 dogs who built the atlas.

See Li83_Li83 in the atlas
About Li83_Li83
  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
Li83_Li83's nearest neighbors

The five dogs in the atlas whose genomes sit closest to Li83_Li83's. Click any of them to keep exploring.

  1. PFZ42E11_PFZ42E11 Village Dog Burkina Faso 18.01
  2. PFZ42G10_PFZ42G10 Village Dog Ghana 18.63
  3. Li1_Li1 Village Dog Liberia Lofa 18.70
  4. Li69_Li69 Village Dog Liberia Lofa 19.95
  5. PFZ3H07_PFZ3H07 Village Dog Namibia Northern 20.25
Li83_Li83's breed

Li83_Li83 pulls strongly toward the Golden Retriever cluster.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 100%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Village Dog Nigeria.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/T
SMAD2 A/G
LCORL G/G
STC2 C/C
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 T/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 G/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 6.077
y 1.704
z -0.042
Top-3 principal components by |z|

The 3 PCs on which Li83_Li83 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC26 z = -6.22
  • chr6:1,658,873 loading 0.0279
  • chr6:1,741,489 loading 0.0277
  • chr27:35,211,437 loading -0.0271
PC27 z = -4.42
  • chr12:64,188,765 loading 0.0337
  • chr23:18,821,315 loading -0.0287
  • chr4:53,307,196 loading -0.0287
PC11 z = 2.38
  • chr6:60,987,558 loading 0.0302
  • chr18:25,790,852 loading 0.0293
  • chr14:14,074,192 loading -0.0293
Ancestry reconstruction error: 0.30
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