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GRLS Hero Oldie · Founder
Cosmic medallion portrait of Oldies_grlsaf837bd5, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

Oldies_grlsaf837bd5

Oldies_grlsaf837bd5 is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See Oldies_grlsaf837bd5 in the atlas
About Oldies_grlsaf837bd5

Oldies_grlsaf837bd5 sits near the center of the Golden Retriever cluster - genetically very typical for the breed.

  • Predicted medium by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
Oldies_grlsaf837bd5's nearest neighbors

The five dogs in the atlas whose genomes sit closest to Oldies_grlsaf837bd5's. Click any of them to keep exploring.

  1. PFZ5E09_PFZ5E09 Golden Retriever 27.46
  2. GRLS_grls5Q8YPTEE Golden Retriever 28.51
  3. PILOT_grlsT1SJRZOO Golden Retriever 28.54
  4. GRLS_grlsBC81D299 Golden Retriever 28.79
  5. Oldies_grls82b7fdf5 Golden Retriever 28.91
Oldies_grlsaf837bd5's breed

Oldies_grlsaf837bd5 sits firmly in the Golden Retriever cluster.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 100%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 C/C
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 C/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 8.142
y 10.725
z 7.041
PCA-256 distance from breed centroid
24.25
Outlier percentile in breed
1
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which Oldies_grlsaf837bd5 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC219 z = -2.50
  • chr11:18,600,601 loading 0.0312
  • chr14:14,201,384 loading 0.0302
  • chr3:6,077,116 loading -0.0298
PC156 z = 2.47
  • chr24:4,330,562 loading 0.0395
  • chr1:76,396,561 loading -0.0378
  • chr24:4,851,124 loading -0.0357
PC183 z = -2.22
  • chr23:32,351,248 loading 0.0384
  • chr7:40,629,884 loading 0.0327
  • chr21:33,590,242 loading -0.0320
Ancestry reconstruction error: 0.47
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