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GRLS Hero Oldie · Founder
Cosmic medallion portrait of Oldies_grlsf24dc4de, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

Oldies_grlsf24dc4de

Oldies_grlsf24dc4de is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See Oldies_grlsf24dc4de in the atlas
About Oldies_grlsf24dc4de

Oldies_grlsf24dc4de sits at the edge of the Golden Retriever cluster but still well within it.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
Oldies_grlsf24dc4de's nearest neighbors

The five dogs in the atlas whose genomes sit closest to Oldies_grlsf24dc4de's. Click any of them to keep exploring.

  1. GRLS_grls2RNDQUCC Golden Retriever 29.25
  2. GRLS_grlsP17EHTZZ Golden Retriever 29.69
  3. PILOT_grlsQK6Y1QII Golden Retriever 30.39
  4. GRLS_grlsJZMYLXUU Golden Retriever 30.53
  5. PFZ7A08_PFZ7A08 Golden Retriever 30.88
Oldies_grlsf24dc4de's breed

Oldies_grlsf24dc4de sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 73%
  2. Labrador Retriever 28%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 C/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 5.575
y 10.677
z 7.637
PCA-256 distance from breed centroid
35.30
Outlier percentile in breed
54
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which Oldies_grlsf24dc4de scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC213 z = -3.02
  • chr28:12,405,348 loading 0.0374
  • chr22:28,989,668 loading -0.0358
  • chr20:42,542,218 loading -0.0345
PC19 z = -2.83
  • chr36:5,342,283 loading 0.0327
  • chr3:69,391,244 loading 0.0300
  • chr25:17,826,837 loading -0.0278
PC252 z = 2.65
  • chr19:30,132,204 loading 0.0320
  • chr25:21,796,415 loading -0.0316
  • chr3:5,565,848 loading 0.0303
Ancestry reconstruction error: 0.66
Back to the Atlas →