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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ7A08_PFZ7A08, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ7A08_PFZ7A08

PFZ7A08_PFZ7A08 is a Golden Retriever from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ7A08_PFZ7A08 in the atlas
About PFZ7A08_PFZ7A08

PFZ7A08_PFZ7A08 sits at the edge of the Golden Retriever cluster but still well within it.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
PFZ7A08_PFZ7A08's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ7A08_PFZ7A08's. Click any of them to keep exploring.

  1. GRLS_grlsYYIG2ESS Golden Retriever 26.15
  2. PFZ26C01_PFZ26C01 Golden Retriever 27.39
  3. GRLS_grls00NB23WW Golden Retriever 28.35
  4. GRLS_grls3E6Q6J Golden Retriever 29.02
  5. GRLS_grlsCPOB0399 Golden Retriever 29.14
PFZ7A08_PFZ7A08's breed

PFZ7A08_PFZ7A08 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 82%
  2. Labrador Retriever 18%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 C/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 T/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 5.312
y 10.742
z 7.643
PCA-256 distance from breed centroid
35.49
Outlier percentile in breed
55
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ7A08_PFZ7A08 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC19 z = -3.53
  • chr36:5,342,283 loading 0.0327
  • chr3:69,391,244 loading 0.0300
  • chr25:17,826,837 loading -0.0278
PC194 z = -2.97
  • chr25:31,475,309 loading 0.0351
  • chr3:6,392,552 loading 0.0298
  • chr25:27,400,046 loading 0.0293
PC249 z = 2.65
  • chr6:30,830,915 loading 0.0329
  • chr1:22,842,587 loading 0.0316
  • chr7:61,438,680 loading -0.0291
Ancestry reconstruction error: 0.65
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