Skip to main content
snıff
CanVAS JenkinsWGS · Founder
Cosmic medallion portrait of PAP_32323_PAP_32323, a Papillon
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PAP_32323_PAP_32323

PAP_32323_PAP_32323 is a Papillon from the JenkinsWGS research cohort. One of 14,478 dogs who built the atlas.

See PAP_32323_PAP_32323 in the atlas
About PAP_32323_PAP_32323

PAP_32323_PAP_32323 sits well inside the Papillon cluster - a fairly typical example.

  • Predicted medium by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries both copies of the FGF4 chondrodysplasia retrogene - the short-leg variant in Dachshund, Pembroke Corgi, Basset Hound.
  • Smooth coat. No wire-furnishings variant at RSPO2.
PAP_32323_PAP_32323's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PAP_32323_PAP_32323's. Click any of them to keep exploring.

  1. PFZ6B01_PFZ6B01 Papillon 18.13
  2. PFZ6H06_PFZ6H06 Papillon 18.95
  3. PFZ29B02_PFZ29B02 Papillon 19.34
  4. PFZ6F04_PFZ6F04 Papillon 19.37
  5. PFZ6A02_PFZ6A02 Papillon 19.75
PAP_32323_PAP_32323's breed

PAP_32323_PAP_32323 sits in the Papillon cluster, with genome overlap to Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Papillon 94%
  2. Golden Retriever 6%
Source

From the CanVAS (JenkinsWGS cohort) . Breed-page reference: Papillon.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 T/T
Coat
RSPO2 C/C
FGF5 T/T
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x -0.781
y 13.665
z 8.431
PCA-256 distance from breed centroid
17.59
Outlier percentile in breed
28
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PAP_32323_PAP_32323 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC82 z = 5.66
  • chr1:68,097,128 loading 0.0396
  • chr1:69,785,342 loading -0.0385
  • chr1:70,040,058 loading 0.0383
PC83 z = -5.15
  • chr4:1,519,291 loading 0.0346
  • chr4:1,791,116 loading 0.0333
  • chr4:1,268,630 loading 0.0330
PC91 z = -4.74
  • chr10:1,924,717 loading 0.0382
  • chr10:1,676,762 loading 0.0377
  • chr30:3,709,721 loading 0.0366
Ancestry reconstruction error: 0.30
Back to the Atlas →