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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ13C11_PFZ13C11, a Rhodesian Ridgeback
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ13C11_PFZ13C11

PFZ13C11_PFZ13C11 is a Rhodesian Ridgeback from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ13C11_PFZ13C11 in the atlas
About PFZ13C11_PFZ13C11

PFZ13C11_PFZ13C11 sits well inside the Rhodesian Ridgeback cluster - a fairly typical example.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Carrier of the RSPO2 wire-coat variant (single copy).
PFZ13C11_PFZ13C11's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ13C11_PFZ13C11's. Click any of them to keep exploring.

  1. PFZ15A08_PFZ15A08 Rhodesian Ridgeback 16.76
  2. PFZ42D06_PFZ42D06 Rhodesian Ridgeback 17.57
  3. PFZ15G12_PFZ15G12 Rhodesian Ridgeback 18.16
  4. PFZ13H11_PFZ13H11 Rhodesian Ridgeback 18.30
  5. PFZ12H05_PFZ12H05 Rhodesian Ridgeback 18.45
PFZ13C11_PFZ13C11's breed

PFZ13C11_PFZ13C11 sits firmly in the Golden Retriever cluster.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 100%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Rhodesian Ridgeback.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 T/T
SMAD2 G/G
LCORL A/A
STC2 C/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 T/C
FGF4·CFA12 T/C
Coat
RSPO2 C/T
FGF5 T/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 G/A
Skull shape
BMP3 C/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 4.304
y -0.619
z 7.790
PCA-256 distance from breed centroid
41.54
Outlier percentile in breed
26
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ13C11_PFZ13C11 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC229 z = 4.43
  • chr1:6,763,543 loading 0.0357
  • chr22:9,968,688 loading -0.0319
  • chr5:58,349,244 loading -0.0314
PC238 z = -4.07
  • chr19:11,652,672 loading 0.0365
  • chr13:13,884,830 loading -0.0338
  • chr3:70,346,120 loading -0.0302
PC244 z = 3.84
  • chr9:27,289,940 loading 0.0354
  • chr25:21,796,415 loading 0.0335
  • chr20:38,277,512 loading -0.0333
Ancestry reconstruction error: 0.87
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