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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ16B08_PFZ16B08, a Jack Russell Terrier
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ16B08_PFZ16B08

PFZ16B08_PFZ16B08 is a Jack Russell Terrier from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ16B08_PFZ16B08 in the atlas
About PFZ16B08_PFZ16B08

PFZ16B08_PFZ16B08 sits well inside the Jack Russell Terrier cluster - a fairly typical example.

  • Predicted small by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Carrier of the RSPO2 wire-coat variant (single copy).
PFZ16B08_PFZ16B08's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ16B08_PFZ16B08's. Click any of them to keep exploring.

  1. PFZ44E05_PFZ44E05 Jack Russell Terrier 21.41
  2. PFZ34B05_PFZ34B05 Jack Russell Terrier 21.94
  3. PFZ44H05_PFZ44H05 Jack Russell Terrier 21.99
  4. PFZ33A05_PFZ33A05 Jack Russell Terrier 22.16
  5. PFZ34C09_PFZ34C09 Jack Russell Terrier 22.21
PFZ16B08_PFZ16B08's breed

PFZ16B08_PFZ16B08 sits in the Jack Russell Terrier cluster, with genome overlap to Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Jack Russell Terrier 92%
  2. Golden Retriever 8%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Jack Russell Terrier.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/C
SMAD2 A/G
LCORL G/G
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 T/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 T/C
KRT71 T/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 3.412
y 0.734
z 3.691
PCA-256 distance from breed centroid
20.70
Outlier percentile in breed
37
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ16B08_PFZ16B08 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC69 z = -2.59
  • chr28:2,486,426 loading 0.0331
  • chr15:29,010,464 loading -0.0324
  • chr27:17,119,793 loading -0.0316
PC71 z = -2.48
  • chr22:1,808,281 loading 0.0402
  • chr22:2,157,682 loading 0.0366
  • chr22:2,072,452 loading 0.0364
PC74 z = 2.41
  • chr22:1,996,400 loading 0.0833
  • chr22:2,231,766 loading 0.0832
  • chr22:2,271,992 loading 0.0828
Ancestry reconstruction error: 0.53
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