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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ16E03_PFZ16E03, a Spinone Italiano
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ16E03_PFZ16E03

PFZ16E03_PFZ16E03 is a Spinone Italiano from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ16E03_PFZ16E03 in the atlas
About PFZ16E03_PFZ16E03
  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
PFZ16E03_PFZ16E03's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ16E03_PFZ16E03's. Click any of them to keep exploring.

  1. ISP_21897_ISP_21897 Italian Spinone 18.33
  2. PFZ17A07_PFZ17A07 Spinone Italiano 19.20
  3. ISP_28162_ISP_28162 Italian Spinone 21.22
  4. PFZ34C02_PFZ34C02 Large Munsterlander 22.32
  5. PFZ2H01_PFZ2H01 Village Dog Peru Puno 23.54
PFZ16E03_PFZ16E03's breed

PFZ16E03_PFZ16E03 sits in the Gordon Setter cluster, with genome overlap to Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Gordon Setter 62%
  2. Golden Retriever 38%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Spinone Italiano.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 T/T
SMAD2 G/G
LCORL A/G
STC2 C/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 T/C
Coat
RSPO2 T/T
FGF5 T/T
KRT71 T/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 4.362
y 0.655
z 1.912
Top-3 principal components by |z|

The 3 PCs on which PFZ16E03_PFZ16E03 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC91 z = 1.66
  • chr10:1,924,717 loading 0.0382
  • chr10:1,676,762 loading 0.0377
  • chr30:3,709,721 loading 0.0366
PC248 z = 1.62
  • chr26:5,045,393 loading 0.0400
  • chr26:4,196,092 loading -0.0355
  • chr26:4,873,718 loading -0.0344
PC212 z = 1.60
  • chr28:326,614 loading 0.0378
  • chr2:50,919,591 loading 0.0372
  • chr28:1,791,942 loading -0.0335
Ancestry reconstruction error: 0.64
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