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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ18G02_PFZ18G02, a Irish Setter
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ18G02_PFZ18G02

PFZ18G02_PFZ18G02 is a Irish Setter from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ18G02_PFZ18G02 in the atlas
About PFZ18G02_PFZ18G02

PFZ18G02_PFZ18G02 sits well inside the Irish Setter cluster - a fairly typical example.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
PFZ18G02_PFZ18G02's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ18G02_PFZ18G02's. Click any of them to keep exploring.

  1. PFZ13H10_PFZ13H10 Irish Setter 23.60
  2. IS_34583_IS_34583 Irish Setter 24.10
  3. PFZ15E12_PFZ15E12 Irish Setter 24.51
  4. IS_18850_IS_18850 Irish Setter 24.73
  5. PFZ36C02_PFZ36C02 Irish Setter 26.40
PFZ18G02_PFZ18G02's breed

PFZ18G02_PFZ18G02 sits in the Irish Setter cluster, with genome overlap to Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Irish Setter 86%
  2. Golden Retriever 14%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Irish Setter.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 T/T
SMAD2 G/G
LCORL A/A
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 C/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 3.057
y 0.083
z 2.484
PCA-256 distance from breed centroid
32.09
Outlier percentile in breed
30
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ18G02_PFZ18G02 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC98 z = -6.12
  • chr1:70,040,058 loading 0.0369
  • chr1:99,414,793 loading -0.0351
  • chr24:7,157,643 loading 0.0343
PC118 z = 5.56
  • chr13:4,612,002 loading 0.0350
  • chr13:4,346,598 loading 0.0329
  • chr10:6,497,921 loading 0.0313
PC107 z = 4.95
  • chr10:6,497,921 loading 0.0390
  • chr3:5,565,848 loading -0.0351
  • chr3:6,720,531 loading 0.0336
Ancestry reconstruction error: 0.41
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