Skip to main content
snıff
CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ1G05_PFZ1G05, a Village Dog Mexico Mexico City
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ1G05_PFZ1G05

PFZ1G05_PFZ1G05 is labelled Village Dog Mexico Mexico City in the Hayward2016 cohort - a catch-all CanVAS label, not a literal ancestry call. One of 14,478 dogs who built the atlas.

See PFZ1G05_PFZ1G05 in the atlas
About PFZ1G05_PFZ1G05
  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
PFZ1G05_PFZ1G05's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ1G05_PFZ1G05's. Click any of them to keep exploring.

  1. FJ20_FJ20 Village Dog Fiji Viti Levu 21.24
  2. FJ04_FJ04 Village Dog Fiji Viti Levu 21.69
  3. PFZ2A11_PFZ2A11 Village Dog Peru Loreto 21.87
  4. PFZ2B04_PFZ2B04 Village Dog Dominican Republic 22.06
  5. PFZ3F05_PFZ3F05 Village Dog Mexico Mexico City 22.16
PFZ1G05_PFZ1G05's breed

PFZ1G05_PFZ1G05 pulls strongly toward the Golden Retriever cluster.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 100%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Village Dog Mexico Mexico City.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 C/C
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 G/G
Skull shape
BMP3 C/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 4.083
y 1.543
z 1.960
Top-3 principal components by |z|

The 3 PCs on which PFZ1G05_PFZ1G05 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC232 z = 1.85
  • chr8:13,394,852 loading 0.0320
  • chr30:2,998,314 loading 0.0313
  • chr12:26,709,882 loading 0.0290
PC227 z = 1.74
  • chr27:43,803,988 loading 0.0373
  • chr12:19,514,576 loading 0.0344
  • chr20:11,758,428 loading -0.0328
PC255 z = -1.59
  • chr23:37,041,440 loading 0.0347
  • chr1:100,944,840 loading 0.0344
  • chr1:101,382,836 loading -0.0320
Ancestry reconstruction error: 0.63
Back to the Atlas →