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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ25C01_PFZ25C01, a Village Dog Papua New Guinea East Highlands
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ25C01_PFZ25C01

PFZ25C01_PFZ25C01 is labelled Village Dog Papua New Guinea East Highlands in the Hayward2016 cohort - a catch-all CanVAS label, not a literal ancestry call. One of 14,478 dogs who built the atlas.

See PFZ25C01_PFZ25C01 in the atlas
About PFZ25C01_PFZ25C01

PFZ25C01_PFZ25C01 sits at the edge of the Village Dog Papua New Guinea East Highlands cluster but still well within it.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Smooth coat. No wire-furnishings variant at RSPO2.
PFZ25C01_PFZ25C01's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ25C01_PFZ25C01's. Click any of them to keep exploring.

  1. PG103_PG103 Village Dog Papua New Guinea East Highlands 21.27
  2. PG93_PG93 Village Dog Papua New Guinea East Highlands 21.73
  3. PG94_PG94 Village Dog Papua New Guinea East Highlands 21.79
  4. PFZ1F04_PFZ1F04 Village Dog Papua New Guinea East Highlands 22.07
  5. PFZ5G08_PFZ5G08 Village Dog Papua New Guinea East Highlands 22.14
PFZ25C01_PFZ25C01's breed

PFZ25C01_PFZ25C01 pulls strongly toward the Golden Retriever cluster.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 100%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Village Dog Papua New Guinea East Highlands.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 C/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 T/C
FGF4·CFA12 T/C
Coat
RSPO2 C/C
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 4.004
y 2.582
z 2.440
PCA-256 distance from breed centroid
15.32
Outlier percentile in breed
64
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ25C01_PFZ25C01 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC160 z = -2.46
  • chr26:4,196,092 loading 0.0325
  • chr1:1,402,180 loading -0.0321
  • chr17:2,046,668 loading -0.0309
PC172 z = -1.92
  • chr13:4,083,191 loading 0.0359
  • chr24:4,114,956 loading 0.0356
  • chr13:12,284,714 loading 0.0349
PC162 z = -1.73
  • chr6:16,267,511 loading 0.0413
  • chr6:16,208,125 loading 0.0394
  • chr6:17,304,623 loading -0.0387
Ancestry reconstruction error: 0.67
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