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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ26B07_PFZ26B07, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ26B07_PFZ26B07

PFZ26B07_PFZ26B07 is a Golden Retriever from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ26B07_PFZ26B07 in the atlas
About PFZ26B07_PFZ26B07

PFZ26B07_PFZ26B07 sits at the edge of the Golden Retriever cluster but still well within it.

  • Predicted medium by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Smooth coat. No wire-furnishings variant at RSPO2.
PFZ26B07_PFZ26B07's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ26B07_PFZ26B07's. Click any of them to keep exploring.

  1. PFZ24H02_PFZ24H02 Golden Retriever 22.58
  2. PFZ4B11_PFZ4B11 Golden Retriever 34.01
  3. GRLS_grlsGXI98U11 Golden Retriever 35.26
  4. GRLS_grlsISV93MPP Golden Retriever 35.53
  5. PFZ16D03_PFZ16D03 Golden Retriever 35.54
PFZ26B07_PFZ26B07's breed

PFZ26B07_PFZ26B07 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 81%
  2. Labrador Retriever 19%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 C/T
SMAD2 A/G
LCORL G/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 C/C
KRT71 C/C
MC1R T/T
Ear set
MSRB3 A/A
Skull shape
BMP3 C/C
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 8.461
y 9.829
z 8.069
PCA-256 distance from breed centroid
34.62
Outlier percentile in breed
51
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ26B07_PFZ26B07 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC213 z = 3.25
  • chr28:12,405,348 loading 0.0374
  • chr22:28,989,668 loading -0.0358
  • chr20:42,542,218 loading -0.0345
PC227 z = -2.71
  • chr27:43,803,988 loading 0.0373
  • chr12:19,514,576 loading 0.0344
  • chr20:11,758,428 loading -0.0328
PC201 z = 2.60
  • chr28:5,497,677 loading 0.0416
  • chr28:5,428,661 loading 0.0337
  • chr20:7,134,018 loading 0.0323
Ancestry reconstruction error: 0.58
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