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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ4B11_PFZ4B11, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ4B11_PFZ4B11

PFZ4B11_PFZ4B11 is a Golden Retriever from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ4B11_PFZ4B11 in the atlas
About PFZ4B11_PFZ4B11

PFZ4B11_PFZ4B11 sits at the edge of the Golden Retriever cluster but still well within it.

  • Predicted medium by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Smooth coat. No wire-furnishings variant at RSPO2.
PFZ4B11_PFZ4B11's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ4B11_PFZ4B11's. Click any of them to keep exploring.

  1. PFZ26B07_PFZ26B07 Golden Retriever 34.01
  2. PFZ24H02_PFZ24H02 Golden Retriever 35.77
  3. PFZ40F06_PFZ40F06 Golden Retriever 35.85
  4. GRLS_grlsACGRRV11 Golden Retriever 35.91
  5. GRLS_grlsEKM79DXX Golden Retriever 35.97
PFZ4B11_PFZ4B11's breed

PFZ4B11_PFZ4B11 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 76%
  2. Labrador Retriever 25%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 T/T
SMAD2 A/G
LCORL G/G
STC2 A/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 T/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 8.825
y 9.688
z 8.114
PCA-256 distance from breed centroid
39.25
Outlier percentile in breed
73
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ4B11_PFZ4B11 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC53 z = 3.36
  • chr1:72,254,803 loading 0.0346
  • chr1:70,825,780 loading 0.0344
  • chr14:9,177,180 loading 0.0335
PC77 z = 3.18
  • chr23:13,507,176 loading 0.0356
  • chr6:36,116,228 loading 0.0355
  • chr23:14,586,660 loading 0.0337
PC224 z = 3.03
  • chr1:60,626,811 loading 0.0345
  • chr1:60,550,367 loading 0.0321
  • chr7:17,102,947 loading 0.0300
Ancestry reconstruction error: 0.61
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