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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ31A05_PFZ31A05, a Mix
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ31A05_PFZ31A05

PFZ31A05_PFZ31A05 is a Mix from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ31A05_PFZ31A05 in the atlas
About PFZ31A05_PFZ31A05

PFZ31A05_PFZ31A05 sits near the center of the Mix cluster - genetically very typical for the breed.

  • Predicted small by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
PFZ31A05_PFZ31A05's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ31A05_PFZ31A05's. Click any of them to keep exploring.

  1. PFZ35G04_PFZ35G04 Rat Terrier 20.84
  2. PFZ44G12_PFZ44G12 Rat Terrier 21.47
  3. PFZ3G02_PFZ3G02 Village Dog Brazil 21.66
  4. 8233_8233 Village Dog Belize 21.75
  5. PFZ33B06_PFZ33B06 Jack Russell Terrier 21.77
PFZ31A05_PFZ31A05's breed

PFZ31A05_PFZ31A05 sits firmly in the Golden Retriever cluster.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 100%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Mix.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/C
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 T/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 G/A
Skull shape
BMP3 C/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 4.247
y 1.267
z 2.252
PCA-256 distance from breed centroid
40.15
Outlier percentile in breed
6
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ31A05_PFZ31A05 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC222 z = -1.42
  • chr12:60,458,843 loading 0.0369
  • chr13:14,089,127 loading 0.0363
  • chr34:29,222,122 loading -0.0309
PC249 z = 1.39
  • chr6:30,830,915 loading 0.0329
  • chr1:22,842,587 loading 0.0316
  • chr7:61,438,680 loading -0.0291
PC133 z = 1.28
  • chr6:3,210,008 loading 0.0329
  • chr28:1,791,942 loading 0.0327
  • chr28:1,882,913 loading 0.0326
Ancestry reconstruction error: 0.57
Back to the Atlas →