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CanVAS Shannon · Founder
Cosmic medallion portrait of PFZ31A10_PFZ31A10, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ31A10_PFZ31A10

PFZ31A10_PFZ31A10 is a Golden Retriever from the Shannon research cohort. One of 14,478 dogs who built the atlas.

See PFZ31A10_PFZ31A10 in the atlas
About PFZ31A10_PFZ31A10

PFZ31A10_PFZ31A10 is a strong genetic outlier within the Golden Retriever cluster - among the most distinctive examples of their breed.

  • Predicted medium by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Smooth coat. No wire-furnishings variant at RSPO2.
PFZ31A10_PFZ31A10's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ31A10_PFZ31A10's. Click any of them to keep exploring.

  1. PFZ31F10_PFZ31F10 Golden Retriever 32.38
  2. PFZ31B10_PFZ31B10 Golden Retriever 33.70
  3. PILOT_grlsPFK771GG Golden Retriever 39.05
  4. PFZ31H10_PFZ31H10 Golden Retriever 39.75
  5. GRLS_grls3GLTTX00 Golden Retriever 40.58
PFZ31A10_PFZ31A10's breed

PFZ31A10_PFZ31A10 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 80%
  2. Labrador Retriever 20%
Source

From the CanVAS (Shannon cohort) . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 C/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 C/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/C
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 9.389
y 10.534
z 9.203
PCA-256 distance from breed centroid
48.59
Outlier percentile in breed
97
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ31A10_PFZ31A10 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC49 z = 5.63
  • chr22:1,808,281 loading 0.0358
  • chr1:70,511,608 loading 0.0354
  • chr22:2,157,682 loading 0.0341
PC53 z = -5.41
  • chr1:72,254,803 loading 0.0346
  • chr1:70,825,780 loading 0.0344
  • chr14:9,177,180 loading 0.0335
PC107 z = 4.90
  • chr10:6,497,921 loading 0.0390
  • chr3:5,565,848 loading -0.0351
  • chr3:6,720,531 loading 0.0336
Ancestry reconstruction error: 0.71
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