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CanVAS Shannon · Founder
Cosmic medallion portrait of PFZ31E10_PFZ31E10, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ31E10_PFZ31E10

PFZ31E10_PFZ31E10 is a Golden Retriever from the Shannon research cohort. One of 14,478 dogs who built the atlas.

See PFZ31E10_PFZ31E10 in the atlas
About PFZ31E10_PFZ31E10

PFZ31E10_PFZ31E10 is a notable Golden Retriever - distinctive within the breed.

  • Predicted small by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
PFZ31E10_PFZ31E10's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ31E10_PFZ31E10's. Click any of them to keep exploring.

  1. PFZ31H10_PFZ31H10 Golden Retriever 26.64
  2. PFZ31E11_PFZ31E11 Golden Retriever 35.62
  3. PFZ31B10_PFZ31B10 Golden Retriever 37.81
  4. PFZ31C11_PFZ31C11 Golden Retriever 38.89
  5. GRLS_grlsTIM0LS55 Golden Retriever 39.32
PFZ31E10_PFZ31E10's breed

PFZ31E10_PFZ31E10 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 82%
  2. Labrador Retriever 18%
Source

From the CanVAS (Shannon cohort) . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 T/C
KRT71 C/C
MC1R T/T
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 8.817
y 10.716
z 8.963
PCA-256 distance from breed centroid
43.48
Outlier percentile in breed
88
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ31E10_PFZ31E10 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC82 z = 3.96
  • chr1:68,097,128 loading 0.0396
  • chr1:69,785,342 loading -0.0385
  • chr1:70,040,058 loading 0.0383
PC79 z = -3.58
  • chr3:7,389,779 loading 0.0444
  • chr3:6,720,531 loading -0.0378
  • chr3:6,392,552 loading -0.0378
PC53 z = -3.38
  • chr1:72,254,803 loading 0.0346
  • chr1:70,825,780 loading 0.0344
  • chr14:9,177,180 loading 0.0335
Ancestry reconstruction error: 0.65
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