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CanVAS Shannon · Founder
Cosmic medallion portrait of PFZ31E11_PFZ31E11, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ31E11_PFZ31E11

PFZ31E11_PFZ31E11 is a Golden Retriever from the Shannon research cohort. One of 14,478 dogs who built the atlas.

See PFZ31E11_PFZ31E11 in the atlas
About PFZ31E11_PFZ31E11

PFZ31E11_PFZ31E11 sits at the edge of the Golden Retriever cluster but still well within it.

  • Predicted small by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Smooth coat. No wire-furnishings variant at RSPO2.
PFZ31E11_PFZ31E11's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ31E11_PFZ31E11's. Click any of them to keep exploring.

  1. PFZ31B11_PFZ31B11 Golden Retriever 24.54
  2. PFZ31C11_PFZ31C11 Golden Retriever 24.90
  3. PFZ31H10_PFZ31H10 Golden Retriever 25.00
  4. GRLS_grls74CM5J99 Golden Retriever 26.81
  5. PFZ31C10_PFZ31C10 Golden Retriever 26.88
PFZ31E11_PFZ31E11's breed

PFZ31E11_PFZ31E11 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 85%
  2. Labrador Retriever 15%
Source

From the CanVAS (Shannon cohort) . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/C
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 C/C
KRT71 C/C
MC1R T/T
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 8.613
y 10.739
z 8.857
PCA-256 distance from breed centroid
35.34
Outlier percentile in breed
54
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ31E11_PFZ31E11 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC129 z = -3.64
  • chr9:12,031,144 loading 0.0367
  • chr13:1,840,654 loading -0.0344
  • chr9:14,628,871 loading -0.0343
PC181 z = -3.09
  • chr19:2,539,757 loading 0.0344
  • chr3:6,392,552 loading -0.0326
  • chr6:16,157,160 loading 0.0301
PC105 z = -3.01
  • chr9:10,719,447 loading 0.0424
  • chr34:1,972,619 loading -0.0401
  • chr34:1,432,211 loading -0.0400
Ancestry reconstruction error: 0.57
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