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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ32A05_PFZ32A05, a American Cocker Spaniel
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ32A05_PFZ32A05

PFZ32A05_PFZ32A05 is a American Cocker Spaniel from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ32A05_PFZ32A05 in the atlas
About PFZ32A05_PFZ32A05

PFZ32A05_PFZ32A05 sits at the edge of the American Cocker Spaniel cluster but still well within it.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries both copies of the FGF4 chondrodysplasia retrogene - the short-leg variant in Dachshund, Pembroke Corgi, Basset Hound.
  • Carrier of the RSPO2 wire-coat variant (single copy).
PFZ32A05_PFZ32A05's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ32A05_PFZ32A05's. Click any of them to keep exploring.

  1. ACS_34278_ACS_34278 American Cocker Spaniel 14.40
  2. PFZ15B04_PFZ15B04 American Cocker Spaniel 15.26
  3. PFZ37D11_PFZ37D11 American Cocker Spaniel 15.42
  4. PFZ14E10_PFZ14E10 American Cocker Spaniel 16.08
  5. PFZ38F07_PFZ38F07 American Cocker Spaniel 16.17
PFZ32A05_PFZ32A05's breed

PFZ32A05_PFZ32A05 sits in the American Cocker Spaniel cluster, with genome overlap to Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. American Cocker Spaniel 94%
  2. Golden Retriever 6%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: American Cocker Spaniel.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 T/T
Coat
RSPO2 C/T
FGF5 C/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 G/G
Skull shape
BMP3 C/C
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 1.775
y 7.801
z 0.919
PCA-256 distance from breed centroid
19.00
Outlier percentile in breed
70
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ32A05_PFZ32A05 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC34 z = -10.34
  • chr12:32,936,523 loading 0.0310
  • chr24:6,196,307 loading 0.0310
  • chr24:10,982,162 loading 0.0302
PC32 z = 7.24
  • chr23:20,231,163 loading 0.0295
  • chr22:42,651,822 loading -0.0294
  • chr27:39,738,665 loading 0.0291
PC37 z = 4.07
  • chr30:33,900,950 loading 0.0365
  • chr1:31,256,526 loading 0.0299
  • chr28:38,109,009 loading 0.0284
Ancestry reconstruction error: 0.17
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