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CanVAS Shannon · Founder
Cosmic medallion portrait of PFZ36F03_PFZ36F03, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ36F03_PFZ36F03

PFZ36F03_PFZ36F03 is a Golden Retriever from the Shannon research cohort. One of 14,478 dogs who built the atlas.

See PFZ36F03_PFZ36F03 in the atlas
About PFZ36F03_PFZ36F03

PFZ36F03_PFZ36F03 sits near the center of the Golden Retriever cluster - genetically very typical for the breed.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
PFZ36F03_PFZ36F03's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ36F03_PFZ36F03's. Click any of them to keep exploring.

  1. GRLS_grls1UDS7MJJ Golden Retriever 31.52
  2. GRLS_grlsOG65MK55 Golden Retriever 31.89
  3. GRLS_grlsS5QXUI22 Golden Retriever 32.19
  4. GRLS_grlsNHFVIJ33 Golden Retriever 32.34
  5. GRLS_grls20EDCSKK Golden Retriever 32.48
PFZ36F03_PFZ36F03's breed

PFZ36F03_PFZ36F03 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 75%
  2. Labrador Retriever 26%
Source

From the CanVAS (Shannon cohort) . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 T/T
SMAD2 A/G
LCORL G/G
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 C/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/C
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 8.048
y 10.752
z 7.043
PCA-256 distance from breed centroid
28.28
Outlier percentile in breed
16
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ36F03_PFZ36F03 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC152 z = 2.78
  • chr25:28,621,324 loading 0.0364
  • chr20:11,911,649 loading 0.0323
  • chr20:7,517,267 loading -0.0311
PC167 z = 2.76
  • chr6:3,625,190 loading 0.0407
  • chr6:3,210,008 loading -0.0395
  • chr6:3,012,938 loading -0.0395
PC91 z = -2.18
  • chr10:1,924,717 loading 0.0382
  • chr10:1,676,762 loading 0.0377
  • chr30:3,709,721 loading 0.0366
Ancestry reconstruction error: 0.54
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