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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ3H06_PFZ3H06, a Village Dog Mexico Morelia
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ3H06_PFZ3H06

PFZ3H06_PFZ3H06 is labelled Village Dog Mexico Morelia in the Hayward2016 cohort - a catch-all CanVAS label, not a literal ancestry call. One of 14,478 dogs who built the atlas.

See PFZ3H06_PFZ3H06 in the atlas
About PFZ3H06_PFZ3H06

PFZ3H06_PFZ3H06 sits well inside the Village Dog Mexico Morelia cluster - a fairly typical example.

  • Predicted medium by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Carrier of the RSPO2 wire-coat variant (single copy).
PFZ3H06_PFZ3H06's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ3H06_PFZ3H06's. Click any of them to keep exploring.

  1. PFZ3E04_PFZ3E04 Village Dog Brazil 20.78
  2. CO32_CO32 Village Dog Colombia 20.93
  3. PFZ1G12_PFZ1G12 Village Dog Peru Puno 21.04
  4. PFZ3B02_PFZ3B02 Village Dog Colombia 21.66
  5. PFZ1C11_PFZ1C11 Village Dog Peru Arequipa 21.72
PFZ3H06_PFZ3H06's breed

PFZ3H06_PFZ3H06 pulls strongly toward the Golden Retriever cluster.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 100%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Village Dog Mexico Morelia.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 C/T
SMAD2 A/G
LCORL G/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 T/C
FGF4·CFA12 T/C
Coat
RSPO2 C/T
FGF5 T/T
KRT71 T/C
MC1R T/T
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 4.462
y 1.548
z 2.092
PCA-256 distance from breed centroid
16.58
Outlier percentile in breed
33
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ3H06_PFZ3H06 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC60 z = 1.44
  • chr2:79,935,004 loading 0.0311
  • chr4:63,750,215 loading -0.0309
  • chr11:23,826,298 loading 0.0301
PC246 z = 1.42
  • chr4:78,506,139 loading 0.0305
  • chr26:20,960,217 loading -0.0303
  • chr22:28,657,814 loading -0.0289
PC243 z = 1.40
  • chr28:2,607,542 loading 0.0337
  • chr6:55,527,821 loading 0.0334
  • chr28:36,111,093 loading -0.0311
Ancestry reconstruction error: 0.56
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