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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ43F01_PFZ43F01, a Greyhound
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ43F01_PFZ43F01

PFZ43F01_PFZ43F01 is a Greyhound from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ43F01_PFZ43F01 in the atlas
About PFZ43F01_PFZ43F01

PFZ43F01_PFZ43F01 sits near the center of the Greyhound cluster - genetically very typical for the breed.

  • Predicted small by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
PFZ43F01_PFZ43F01's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ43F01_PFZ43F01's. Click any of them to keep exploring.

  1. PFZ42F07_PFZ42F07 Greyhound 16.09
  2. Gry_GT246_Gry_GT246 Greyhound 16.31
  3. Gry_GT249_Gry_GT249 Greyhound 17.32
  4. G_26137_G_26137 Greyhound 18.49
  5. Gry_GT248_Gry_GT248 Greyhound 18.70
PFZ43F01_PFZ43F01's breed

PFZ43F01_PFZ43F01 sits in the Greyhound cluster, with genome overlap to Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Greyhound 88%
  2. Golden Retriever 12%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Greyhound.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 C/C
SMAD2 A/A
LCORL G/G
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 T/C
Coat
RSPO2 T/T
FGF5 C/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 3.668
y -3.246
z 5.055
PCA-256 distance from breed centroid
38.72
Outlier percentile in breed
22
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ43F01_PFZ43F01 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC50 z = 6.67
  • chr22:2,473,315 loading 0.0334
  • chr22:1,969,643 loading -0.0326
  • chr4:32,946,669 loading -0.0320
PC48 z = 5.76
  • chr2:6,428,604 loading 0.0354
  • chr22:6,962,924 loading 0.0351
  • chr12:19,589,576 loading 0.0339
PC52 z = -5.74
  • chr36:18,815,377 loading 0.0327
  • chr5:64,065,611 loading -0.0306
  • chr12:41,906,189 loading 0.0276
Ancestry reconstruction error: 0.51
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