Skip to main content
snıff
CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ5E10_PFZ5E10, a Borzoi
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ5E10_PFZ5E10

PFZ5E10_PFZ5E10 is a Borzoi from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ5E10_PFZ5E10 in the atlas
About PFZ5E10_PFZ5E10

PFZ5E10_PFZ5E10 sits near the center of the Borzoi cluster - genetically very typical for the breed.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Smooth coat. No wire-furnishings variant at RSPO2.
PFZ5E10_PFZ5E10's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ5E10_PFZ5E10's. Click any of them to keep exploring.

  1. PFZ5H01_PFZ5H01 Borzoi 18.39
  2. PFZ4F03_PFZ4F03 Borzoi 18.85
  3. PFZ19A03_PFZ19A03 Borzoi 18.94
  4. PFZ4C03_PFZ4C03 Borzoi 18.96
  5. PFZ5D08_PFZ5D08 Borzoi 19.83
PFZ5E10_PFZ5E10's breed

PFZ5E10_PFZ5E10 sits in the Borzoi cluster, with genome overlap to Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Borzoi 91%
  2. Golden Retriever 9%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Borzoi.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/C
SMAD2 G/G
LCORL A/G
STC2 C/C
ADAMTS17 G/A
Leg length
FGF4·CFA18 T/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 T/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/C
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x -0.791
y 14.337
z 4.469
PCA-256 distance from breed centroid
20.29
Outlier percentile in breed
0
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ5E10_PFZ5E10 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC103 z = -9.69
  • chr1:73,451,600 loading 0.0356
  • chr1:69,785,342 loading 0.0343
  • chr18:18,333,364 loading 0.0329
PC106 z = -7.57
  • chr3:6,720,531 loading 0.0359
  • chr6:29,063,786 loading -0.0348
  • chr3:6,180,668 loading 0.0337
PC96 z = -5.13
  • chr4:32,151,890 loading 0.0295
  • chr1:72,831,562 loading 0.0294
  • chr30:30,843,842 loading 0.0291
Ancestry reconstruction error: 0.26
Back to the Atlas →