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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ6C02_PFZ6C02, a Maltese
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ6C02_PFZ6C02

PFZ6C02_PFZ6C02 is a Maltese from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ6C02_PFZ6C02 in the atlas
About PFZ6C02_PFZ6C02

PFZ6C02_PFZ6C02 sits well inside the Maltese cluster - a fairly typical example.

  • Predicted small by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries both copies of the FGF4 chondrodysplasia retrogene - the short-leg variant in Dachshund, Pembroke Corgi, Basset Hound.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
PFZ6C02_PFZ6C02's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ6C02_PFZ6C02's. Click any of them to keep exploring.

  1. MAL_24992_MAL_24992 Maltese 17.78
  2. PFZ9D01_PFZ9D01 Maltese 18.28
  3. PFZ37H01_PFZ37H01 Maltese 18.55
  4. PFZ37F02_PFZ37F02 Maltese 18.80
  5. PFZ9C01_PFZ9C01 Maltese 19.03
PFZ6C02_PFZ6C02's breed

PFZ6C02_PFZ6C02 sits in the Maltese cluster, with genome overlap to Havanese, and Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Maltese 78%
  2. Havanese 16%
  3. Golden Retriever 6%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Maltese.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/C
SMAD2 A/A
LCORL G/G
STC2 A/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 T/T
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 C/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 4.538
y 2.627
z 4.509
PCA-256 distance from breed centroid
17.69
Outlier percentile in breed
46
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ6C02_PFZ6C02 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC30 z = -6.79
  • chr22:1,635,288 loading 0.0319
  • chr13:9,677,426 loading 0.0297
  • chr7:41,071,296 loading 0.0289
PC34 z = 4.08
  • chr12:32,936,523 loading 0.0310
  • chr24:6,196,307 loading 0.0310
  • chr24:10,982,162 loading 0.0302
PC39 z = -2.24
  • chr38:19,205,467 loading 0.0283
  • chr22:8,222,365 loading 0.0280
  • chr29:3,059,812 loading 0.0271
Ancestry reconstruction error: 0.27
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