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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ7F08_PFZ7F08, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ7F08_PFZ7F08

PFZ7F08_PFZ7F08 is a Golden Retriever from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ7F08_PFZ7F08 in the atlas
About PFZ7F08_PFZ7F08

PFZ7F08_PFZ7F08 sits near the center of the Golden Retriever cluster - genetically very typical for the breed.

  • Predicted medium by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
PFZ7F08_PFZ7F08's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ7F08_PFZ7F08's. Click any of them to keep exploring.

  1. GRLS_grls3F95H0TT Golden Retriever 28.75
  2. GRLS_grlsG6X3QR22 Golden Retriever 30.01
  3. PFZ26G07_PFZ26G07 Golden Retriever 30.86
  4. Oldies_grlsb44cc36d Golden Retriever 31.55
  5. GRLS_grlsEI1W4ZQQ Golden Retriever 31.56
PFZ7F08_PFZ7F08's breed

PFZ7F08_PFZ7F08 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 80%
  2. Labrador Retriever 20%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 T/T
SMAD2 A/G
LCORL G/G
STC2 C/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 T/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 7.809
y 10.410
z 7.436
PCA-256 distance from breed centroid
27.40
Outlier percentile in breed
11
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ7F08_PFZ7F08 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC204 z = 2.49
  • chr5:63,349,947 loading 0.0351
  • chr5:63,561,040 loading 0.0350
  • chr5:3,335,614 loading -0.0334
PC158 z = 2.33
  • chr1:69,893,718 loading 0.0314
  • chr1:64,453,595 loading -0.0313
  • chr8:29,102,271 loading -0.0309
PC43 z = -2.29
  • chr28:11,007,373 loading 0.0365
  • chr28:5,497,677 loading 0.0343
  • chr7:43,226,466 loading 0.0325
Ancestry reconstruction error: 0.54
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