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CanVAS JenkinsWGS · Founder
Cosmic medallion portrait of ST_23245_ST_23245, a Skye Terrier
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

ST_23245_ST_23245

ST_23245_ST_23245 is a Skye Terrier from the JenkinsWGS research cohort. One of 14,478 dogs who built the atlas.

See ST_23245_ST_23245 in the atlas
About ST_23245_ST_23245
  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries both copies of the FGF4 chondrodysplasia retrogene - the short-leg variant in Dachshund, Pembroke Corgi, Basset Hound.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
ST_23245_ST_23245's nearest neighbors

The five dogs in the atlas whose genomes sit closest to ST_23245_ST_23245's. Click any of them to keep exploring.

  1. ST_25135_ST_25135 Skye Terrier 12.14
  2. PFZ33B06_PFZ33B06 Jack Russell Terrier 31.88
  3. PFZ35G04_PFZ35G04 Rat Terrier 32.50
  4. HR22_HR22 Posavski Goni 32.84
  5. MAAB_Italy_MAAB_24539 Miniature American Shepherd 32.94
ST_23245_ST_23245's breed

ST_23245_ST_23245 sits firmly in the Golden Retriever cluster.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 100%
Source

From the CanVAS (JenkinsWGS cohort) . Breed-page reference: Skye Terrier.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 C/C
SMAD2 A/G
LCORL A/G
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 T/T
FGF4·CFA12 T/T
Coat
RSPO2 T/T
FGF5 C/C
KRT71 C/C
MC1R T/T
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 4.113
y 1.257
z 2.144
Top-3 principal components by |z|

The 3 PCs on which ST_23245_ST_23245 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC245 z = -3.62
  • chr5:79,585,745 loading 0.0313
  • chr14:5,105,246 loading 0.0300
  • chr24:4,166,647 loading -0.0289
PC188 z = 2.92
  • chr7:21,167,050 loading 0.0346
  • chr25:32,919,094 loading 0.0335
  • chr7:21,698,587 loading 0.0335
PC174 z = 2.77
  • chr19:6,752,118 loading 0.0369
  • chr24:5,019,735 loading -0.0328
  • chr4:69,338,731 loading -0.0309
Ancestry reconstruction error: 0.70
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